From: Respiratory coinfections in COVID-19 patients evaluated by BioFire Pneumonia Panel
Category | Target |
---|---|
Typical bacteria | Acinetobacter calcoaceticus–baumannii complex Enterobacter cloacae complex Escherichia coli Haemophilus influenzae Klebsiella aerogenes Klebsiella oxytoca Klebsiella pneumoniae group Moraxella catarrhalis Proteus spp. Pseudomonas aeruginosa Serratia marcescens Staphylococcus aureus Streptococcus agalactiae Streptococcus pneumoniae Streptococcus pyogenes |
Atypical bacteria | Chlamydia pneumoniae Legionella pneumophilia Mycoplasma pneumoniae |
Viruses | Adenovirus Coronavirus Human metapneumovirus Human rhinovirus/enterovirus Influenza A Influenza B Middle East respiratory syndrome coronavirus (MERS-CoV) Parainfluenza virus Respiratory syncitial virus |
Antimicrobial resistance genes | Extended spectrum β-lactamase-producing Enterobacteriaceae CTX-M Carbapenemase-producing organisms NDM OXA-48-like VIM IMP KPC Methicillin-resistant Staphylococcus aureus mecA/C and MREJ |